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Invasive pneumococcal disease and investigation of immune deficiency

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Invasive pneumococcal disease and investigation of immune deficiency

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Starship clinical guidelines

Invasive pneumococcal disease is defined as isolation of Streptococcus pneumoniae from a normally sterile site e.g: blood, cerebrospinal fluid or joint. These are seen clinically as conditions such as bacteraemic pneumonia, septicaemia, meningitis, arthritis and peritonitis.

Certain groups are recognised to be at particular risk of IPD as shown below:

Anatomic causesCochlear implants
Asplenia or functional asplenia
Cerebrospinal leaks and anatomic malformations
Primary ImmunodeficiencyAntibody deficiencies such as:
X-linked Agammaglobulinaemia (Bruton's)
Complement deficiency
Secondary ImmunodeficiencyHIV Infection
Secondary to malignancy or immune suppressants or transplantation
Chronic conditionsDiabetes
Down syndrome


With effective pneumococcal conjugate vaccination there has been a decline in invasive pneumococcal disease (IPD), particularly in infants and young children as well as herd effects (protection of unimmunised individuals) in older age groups.

When a case of IPD happens now, in children it may be due to an undiagnosed primary immune deficiency and warrant immunologic testing.

In the absence of any other known risks, prevalence of primary immune deficiency is higher in children older than 2 years of age presenting with primary IPD and in children with recurrent IPD (1, 2).

Below outlines the investigations suggested in any child regardless of age who presents with invasive pneumococcal disease in the absence of known risk factors.

Second-line immune testing

In addition to the above, children presenting with the following will require further discussion with immunology

  • Pneumococcal meningitis

  • Complicated pneumococcal pneumonia

  • Unusual sites of pneumococcal infection

  • Recurrent IPD (2 or more episodes)

  • History of consanguinity

Additional investigations likely to be suggested by immunology:

Lymphocyte subsets

Vaccine antibody responses:

  • Step 1: baseline tetanus, diphtheria, Haemophilus influenzae type b and pneumococcal antibodies

  • Step 2: if any below protective level as defined by testing laboratory, give appropriate booster (e.g. DTaP, Pneumovax if >2 y.o; Synflorix/Prevenar if <2 y.o.)

  • Step 3: ensure repeat antibody levels are done 4 weeks after boosting

Classic and alternate complement pathway activity, C3 and C4. Recommend discussing optimal timing of this test with the on-call immunologist. In some patients these are best performed on recovery from illness (ideally pre-discharge from tertiary centre or prior to transfer back to regional hospital).

Abnormalities identified from the above tests should be discussed with Immunology.

For all cases of recurrent bacterial meningitis comprehensive neuroimaging will need consideration to examine for underlying anatomic defects causing possible CSF breach/fistula.

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